Genomics and the tree physiologist.
Identifieur interne : 004582 ( Main/Exploration ); précédent : 004581; suivant : 004583Genomics and the tree physiologist.
Auteurs : Stan D. Wullschleger ; G A Tuskan ; S P DifazioSource :
- Tree physiology [ 0829-318X ] ; 2002.
Descripteurs français
- KwdFr :
- MESH :
- génétique : Arbres, Plantes, Populus.
- physiologie : Arbres, Populus.
- Génome végétal, Phénomènes physiologiques des plantes.
English descriptors
- KwdEn :
- MESH :
- genetics : Plants, Populus, Trees.
- physiology : Populus, Trees.
- Genome, Plant, Plant Physiological Phenomena.
Abstract
During the last decade, a strong case has been made for viewing trees as model systems in plant biology. More recently, forest biologists have argued for the sequencing of the genome of a forest tree. Now, the United States Department of Energy has announced plans for sequencing the genome of the Populus trichocarpa clone, "Nisqually-1." Thus, forest biology is poised to enter an exciting period of scientific discovery. Embracing new technology and new research paradigms, however, is never easy. It is, therefore, timely to ask how tree physiologists will take advantage of the Populus genome data. We contend that the most attractive opportunities will arise through genome-wide research designed to: (1). examine the differences between trees and herbaceous annuals; (2). explore questions relating to the temporal and spatial scales that characterize the life histories and growth of trees; and (3). investigate cause-and-effect relationships that are intractable to conventional research methodologies. To highlight the potential applications of genomics in tree physiology, we briefly discuss each of these approaches.
DOI: 10.1093/treephys/22.18.1273
PubMed: 12490424
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Wullschleger</name></author><author><name sortKey="Tuskan, G A" sort="Tuskan, G A" uniqKey="Tuskan G" first="G A" last="Tuskan">G A Tuskan</name></author><author><name sortKey="Difazio, S P" sort="Difazio, S P" uniqKey="Difazio S" first="S P" last="Difazio">S P Difazio</name></author></analytic><series><title level="j">Tree physiology</title><idno type="ISSN">0829-318X</idno><imprint><date when="2002" type="published">2002</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Genome, Plant (MeSH)</term><term>Plant Physiological Phenomena (MeSH)</term><term>Plants (genetics)</term><term>Populus (genetics)</term><term>Populus (physiology)</term><term>Trees (genetics)</term><term>Trees (physiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Arbres (génétique)</term><term>Arbres (physiologie)</term><term>Génome végétal (MeSH)</term><term>Phénomènes physiologiques des plantes (MeSH)</term><term>Plantes (génétique)</term><term>Populus (génétique)</term><term>Populus (physiologie)</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Plants</term><term>Populus</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arbres</term><term>Plantes</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Arbres</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Populus</term><term>Trees</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Genome, Plant</term><term>Plant Physiological Phenomena</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Génome végétal</term><term>Phénomènes physiologiques des plantes</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">During the last decade, a strong case has been made for viewing trees as model systems in plant biology. 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To highlight the potential applications of genomics in tree physiology, we briefly discuss each of these approaches.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">12490424</PMID><DateCompleted><Year>2003</Year><Month>05</Month><Day>07</Day></DateCompleted><DateRevised><Year>2019</Year><Month>05</Month><Day>13</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Print">0829-318X</ISSN><JournalIssue CitedMedium="Print"><Volume>22</Volume><Issue>18</Issue><PubDate><Year>2002</Year><Month>Dec</Month></PubDate></JournalIssue><Title>Tree physiology</Title><ISOAbbreviation>Tree Physiol</ISOAbbreviation></Journal><ArticleTitle>Genomics and the tree physiologist.</ArticleTitle><Pagination><MedlinePgn>1273-6</MedlinePgn></Pagination><Abstract><AbstractText>During the last decade, a strong case has been made for viewing trees as model systems in plant biology. More recently, forest biologists have argued for the sequencing of the genome of a forest tree. Now, the United States Department of Energy has announced plans for sequencing the genome of the Populus trichocarpa clone, "Nisqually-1." Thus, forest biology is poised to enter an exciting period of scientific discovery. Embracing new technology and new research paradigms, however, is never easy. It is, therefore, timely to ask how tree physiologists will take advantage of the Populus genome data. We contend that the most attractive opportunities will arise through genome-wide research designed to: (1). examine the differences between trees and herbaceous annuals; (2). explore questions relating to the temporal and spatial scales that characterize the life histories and growth of trees; and (3). investigate cause-and-effect relationships that are intractable to conventional research methodologies. To highlight the potential applications of genomics in tree physiology, we briefly discuss each of these approaches.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wullschleger</LastName><ForeName>Stan D</ForeName><Initials>SD</Initials></Author><Author ValidYN="Y"><LastName>Tuskan</LastName><ForeName>G A</ForeName><Initials>GA</Initials></Author><Author ValidYN="Y"><LastName>DiFazio</LastName><ForeName>S P</ForeName><Initials>SP</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016421">Editorial</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>Canada</Country><MedlineTA>Tree Physiol</MedlineTA><NlmUniqueID>100955338</NlmUniqueID><ISSNLinking>0829-318X</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="N">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018521" MajorTopicYN="N">Plant Physiological Phenomena</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010944" MajorTopicYN="N">Plants</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2002</Year><Month>12</Month><Day>20</Day><Hour>4</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2003</Year><Month>5</Month><Day>8</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2002</Year><Month>12</Month><Day>20</Day><Hour>4</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">12490424</ArticleId><ArticleId IdType="doi">10.1093/treephys/22.18.1273</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list></list><tree><noCountry><name sortKey="Difazio, S P" sort="Difazio, S P" uniqKey="Difazio S" first="S P" last="Difazio">S P Difazio</name><name sortKey="Tuskan, G A" sort="Tuskan, G A" uniqKey="Tuskan G" first="G A" last="Tuskan">G A Tuskan</name><name sortKey="Wullschleger, Stan D" sort="Wullschleger, Stan D" uniqKey="Wullschleger S" first="Stan D" last="Wullschleger">Stan D. 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